BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011G05LP1|AL426262
(799 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1653 1567 0.0
>3x_Contig1653
Length = 14012
Score = 1567 bits (790), Expect = 0.0
Identities = 796/799 (99%)
Strand = Plus / Minus
Query: 1 gatctccaagcaaacctgagtcactatcctgccttccaatacccttcattttcatgtggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12132 gatctccaagcaaacctgagtcactatcctgccttccaatacccttcattttcatgtggg 12073
Query: 61 aattagtcaacttcttggatttttttgagagtcctagttgattagtatttgttagcggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12072 aattagtcaacttcttggatttttttgagagtcctagttgattagtatttgttagcggga 12013
Query: 121 cgttgtgcgaaagaggatcaatcgaaccaaagcccatgacccctccaagagaactatcgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12012 cgttgtgcgaaagaggatcaatcgaaccaaagcccatgacccctccaagagaactatcgt 11953
Query: 181 ttaatccagaaataacccccgcttccatgtwatcaagatccaaaccagatcccaaaggta 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 11952 ttaatccagaaataacccccgcttccatgtaatcaagatccaaaccagatcccaaaggta 11893
Query: 241 aagaccgcttgctagctggctggaccattgtttgatgagatttcgtagagtatgagttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11892 aagaccgcttgctagctggctggaccattgtttgatgagatttcgtagagtatgagttga 11833
Query: 301 aattagaaacatttctagatgatgatggctgggaatgtttcgattgtagaaacacttcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11832 aattagaaacatttctagatgatgatggctgggaatgtttcgattgtagaaacacttcat 11773
Query: 361 ttgtcgaaactgcatccacgaaacccccattcaaatgcagttgattagtggaagcggatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11772 ttgtcgaaactgcatccacgaaacccccattcaaatgcagttgattagtggaagcggatg 11713
Query: 421 attggccagactgagacaaagaagttaggtttgaactggatgacgaggtattaatctgtg 480
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 11712 attggccagactgagacaaagaagtcaggtttgaactggatgacgaggtattaatctgtg 11653
Query: 481 agccccgcgntactttgctttgagattgaccagatccagttaaaccacttcccgattgaa 540
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11652 agccccgcggtactttgctttgagattgaccagatccagttaaaccacttcccgattgaa 11593
Query: 541 gtagacggtgatcagactttcttgggtgctgagacccgtttatagtgttgttattgttgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11592 gtagacggtgatcagactttcttgggtgctgagacccgtttatagtgttgttattgttgc 11533
Query: 601 cgttattgttatcattaatgttattggtattattattactttgatgttgctgctgcatcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11532 cgttattgttatcattaatgttattggtattattattactttgatgttgctgctgcatcc 11473
Query: 661 gttgctgcgataatatagccttccgctgctgataatttacaccgttagaagacagatgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11472 gttgctgcgataatatagccttccgctgctgataatttacaccgttagaagacagatgtt 11413
Query: 721 cctgttgcatggcatgattatgatggtctggtccacttctcagttggccatgcatgttat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11412 cctgttgcatggcatgattatgatggtctggtccacttctcagttggccatgcatgttat 11353
Query: 781 ttgacgctagcgaaccact 799
|||||||||||||||||||
Sbjct: 11352 ttgacgctagcgaaccact 11334
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5751
Number of Sequences: 1807
Number of extensions: 5751
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 799
length of database: 10,358,551
effective HSP length: 16
effective length of query: 783
effective length of database: 10,329,639
effective search space: 8088107337
effective search space used: 8088107337
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)